CDS

Accession Number TCMCG051C16745
gbkey CDS
Protein Id XP_024456729.1
Location complement(join(7791230..7791403,7791528..7791613,7791746..7791818,7791930..7791989,7792212..7792260,7792379..7792479,7792578..7792631,7792705..7792749,7793110..7793307,7793432..7793505,7793744..7793847,7793932..7794001,7794077..7795222,7795334..7795549,7795690..7795773,7795872..7795941,7796710..7796930,7797032..7797047,7797140..7797302,7797418..7797510,7797646..7797703,7797830..7797887,7798001..7798155,7798681..7798728,7798833..7798884,7799261..7799386))
Gene LOC7492129
GeneID 7492129
Organism Populus trichocarpa

Protein

Length 1197aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024600961.1
Definition DNA mismatch repair protein MLH3 isoform X3 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08739        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03430        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005712        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTATAATTAAGCGATTGCCGGTGTCAGCACGCAGCACAATGCGTTCAGGGATCTTGGTGTTTGATTTAACAAGAGTTGTAGAGGAGCTTGTTTTTAATAGCTTGGATGCTGGTGCTAAAAAGGTTTCGGTTTACGTGGCTGTTGGTACCTGCTATGTGAAAGTTTCTGATGATGGATGTGGGATTTCACGGGATGGATTGGTGTTACTGGGAGAAAGATACGTGACCTCAAAGGTTCAACGTTTGGCTGATATGGATGTTGCTAGTGGAAACTTTGGCTTCCGGGGAGAAGCGTTGTCTTCTATCGCTGATGTGTCAGTGTTAGATGTATTGACAAAAGCTCGTGGAATGCCGAATGGATATCGCAAGGTCATGAAGGGATCTAAGTGTTTGTGTTTGGGAATTGATGATGATATTAAAGATGTCGGCACTACAGTTGTTGTCCGTGATTTATTTTACAACCAACCAGTTCGGAGGAAATATATGCAATCCAGCCCTAAGAAGATACTGCACTTGGTAAAAAAATGTGCACTTCGTGTTGCTCTTATGCATTCAGAGGTGTCCTTTAAAGTTGTTGATATTGAAAGTGAGGAGGAGCTTCTCTGCACAAATCCATCTTCTGCAATGTCACTGTTGATGAGTGGATTTGGAATTGAAGATTCCAGCTCTCTTCATGAACTGAATATCAGTGACAGTGTATTAAAGCTTTCTGGCTATATATCTGGTCCTTGCAGTAGTTTTTTCATCAAGGCTTTCCAATATGTTTATATCAATTCACGGTTTGTTTGCAAAGGCCCAATTCACAAATTGCTAAATCACCTGGCCTCTAGATTTGAGCATCCAGATCTGCAGAAGGCTAACAGTGTGTCTCAAAAAGGAAAGAAAAGCAGGCCTCAACCATGTCCAGCTTATATTTTAAATTTGAGTTGCCCTTTCTCTCTCTATGATTTAACCTTTGAGCCATCAAAGACACATGCTGAATTCAAGGATTGGAACCCTATCCTTGCCTTCATTGAGAAGGTCATTCAACAACTCTGGAGGGAATGCACCGTTATTGGAGAATCCTCAACTCGGGCAACAGATACGTTCCAGAAAAATGACATTTGGCAGGAAGGTAATGATATCACATCAGTGAAACAAGATTTTTTTGATGCAGATTTTTCTGGATTTGCAATAAAGAAAGGCGGGGTTAAAATTCACCAGTCTTCTCATCATCTCATTTCTTGCCCTTTGAAGATGCTAGACAAAGAGGTCGACCATCTTTTTCATGGGAAGCATGATAAAGTTCCTCAAGAATTCTACTCAAATGTTTCAGAATTCAAAGAGGAACAAGTTGATAAGGAATTTGTTCTTCAGGATAATTGCTTCTTGGAAGATAGTTTCACTACCAGGGAAAGACTCAGTGATCACATGCAGAGCCATTTCTCAAGCTCAGAATGGCAAAACGAGTCCCCAAAAATTGATTCCGTGGCAAGAAATCAATCTCTTGGGAGTGCATTCTCCTTTGATCATTATGGATTCAGAAACAAATTACCGTTTAGCAAGAGTAATATAAAACCCATTTTACAGAGTTGCTCCTCACAGAAAAGCCTGTCACTTGATAGGGATTTTTTTGCTGACAAGGAAGCATTTGAATTTCTTAATGATGGCTTCAAGAACAAAAGAAGACGGCTTTGGACAGCTGAAAATGTGGGTATCCCAAAAGGGGATACGATATTTGATATCTTTCCCTGTGCTTTACTGCAGGACAATGCATCGTGTACTCAGCAGTTGCCTGCAGATACTGATGGAGCTGAGATGTCTGCAGCTTTTGATCTTCTGCCAGGTGCTTATGTAAATTCTTCTTCACCAAATGGAAAAATTTTAGCTAAAGGGAAAGGTCTTGCATCTAATTCTATCCTACAATTAGAAATGCATGCCTCAGGAAATCATTCATCAATGTCTGATTGGTGTTCTGTAACTTCAAGTGCTTTTTTTCAAGCAAAAGTTTGGGATGCTGAACACTTTCCAGATGATAATGCAAGTGAGGGGAGCAAGGGATGGGGTAAAAAGGAAAATTGTTGGCATCTTCCTGATAGCTGGGAGATTATGTCAAAGCCTTCCAGCCAAGATAACTTCTTCTCAAGTTGTACAAGCAGTGTGTTAGATTTTAAAAATTCAGCTGATTCTAGTAAAGATATCTGCAAATTGCCTCAGTGGCAGGATCAAAATAATGAATTTTCTTTACAACATTCAGATATATCTGTTGGTGAGACAGACTGGCTCCTTTTGGACCCAGGTTCTAAAGATCCTAAAAGGAATGATGAGTGTGAAAGGCAAGAGAATCAACTAAGATATAAAGCTTGTGTACGAGATCGTGTTGCCAAAGAACGATATAGAAGAAGCAATTCAACCCCACCATTTTACAGACTGAAGAGGAGGTTTATTTCCTTAAACAACCACTCAATGAGGAAAGAAGAAGAGCCATACACTCAGTTGTTCCATGATTGGCTCACTTCTCCAGAAGCTAATGACTTTGAGCATCTACCTCTCCAGCCTAGTCATGTGGAGGAGGATTTAACACAAAGAACCAAATCCAATGGAAAGAACATGCCAGATACCATGCCGAACAAGGAGACTCCAGAAGGAAATCCAGAGCACTTCCAACACCCTAAGGCTTATGATTCTTCACCTGAAGCCTTTATGCCAAAGGACACCCAGGAGTCAATGGATTATAGGATCAAATGGCGGAATGGCTGCCAACAAATTGCAAATCACAACACGTCATCCAATGTTGGCAGTCAGCGAAATATACTTGACATCTCTTCGGGGTTCTTGCATCTTGCTGGAAATTTATTAGTTCCAGAATCTATTCATAAGAAGTGCCTTCAGGATGCCAGAGTCCTTCATCAGGTAGACAAGAAATTCATCCCAATTGTAGCTGGTGGGACACTTGCTGTTATAGACCAGCATGCAGCAGATGAAAGGATTCGACTGGAAGAACTTCGTCAAAAGGTATTATCTGGAGAAGAGAAGACAGTTACCTATCTTGATGCTGAACAAGAGCTGATACTTCCTGAAATAGGGTATCAGCTACTTCACAATTATGCTGAACAAGTAAGAGAATGGGGATGGATCTGCAGTATTCAAGGTTCAGGGACCTTCAAGAAGAATTTGAATATTCTCCACCAGCAGCCAACTGTGATTACACTTCTTGCAGTACCATGCATTTTAGGGGTCAATTTGTCTGATGGAGATCTCTTGGAATTTCTGCAGCAGCTTTCTGATACAGATGGCTCTTCAACTTTGCCGCCATCTGTTCTTCGTGTCCTCAATTATAAAGCATGCAGAGGCGCAATCATGTTCGGAGATTCGTTGCTACCATCAGAATGTTCACTTATTGTCGAAGAGCTAAAGCAGACCACACTTTGTTTTCAATGCGCCCACGGGCGACCAACAACTATTCCTGTTGTCAACCTGGAGGCGTTGCAAAAGCAGGTAGCAAAACTTGGAGTGCTAAATGATGGTTCAAATGACTTGTGGCATGGATTACGCCGACAGGAACTCAGCCTTGAACGTGCAGCACAGCGTTTAAGTGCAGCTAGAGGCTAG
Protein:  
MGIIKRLPVSARSTMRSGILVFDLTRVVEELVFNSLDAGAKKVSVYVAVGTCYVKVSDDGCGISRDGLVLLGERYVTSKVQRLADMDVASGNFGFRGEALSSIADVSVLDVLTKARGMPNGYRKVMKGSKCLCLGIDDDIKDVGTTVVVRDLFYNQPVRRKYMQSSPKKILHLVKKCALRVALMHSEVSFKVVDIESEEELLCTNPSSAMSLLMSGFGIEDSSSLHELNISDSVLKLSGYISGPCSSFFIKAFQYVYINSRFVCKGPIHKLLNHLASRFEHPDLQKANSVSQKGKKSRPQPCPAYILNLSCPFSLYDLTFEPSKTHAEFKDWNPILAFIEKVIQQLWRECTVIGESSTRATDTFQKNDIWQEGNDITSVKQDFFDADFSGFAIKKGGVKIHQSSHHLISCPLKMLDKEVDHLFHGKHDKVPQEFYSNVSEFKEEQVDKEFVLQDNCFLEDSFTTRERLSDHMQSHFSSSEWQNESPKIDSVARNQSLGSAFSFDHYGFRNKLPFSKSNIKPILQSCSSQKSLSLDRDFFADKEAFEFLNDGFKNKRRRLWTAENVGIPKGDTIFDIFPCALLQDNASCTQQLPADTDGAEMSAAFDLLPGAYVNSSSPNGKILAKGKGLASNSILQLEMHASGNHSSMSDWCSVTSSAFFQAKVWDAEHFPDDNASEGSKGWGKKENCWHLPDSWEIMSKPSSQDNFFSSCTSSVLDFKNSADSSKDICKLPQWQDQNNEFSLQHSDISVGETDWLLLDPGSKDPKRNDECERQENQLRYKACVRDRVAKERYRRSNSTPPFYRLKRRFISLNNHSMRKEEEPYTQLFHDWLTSPEANDFEHLPLQPSHVEEDLTQRTKSNGKNMPDTMPNKETPEGNPEHFQHPKAYDSSPEAFMPKDTQESMDYRIKWRNGCQQIANHNTSSNVGSQRNILDISSGFLHLAGNLLVPESIHKKCLQDARVLHQVDKKFIPIVAGGTLAVIDQHAADERIRLEELRQKVLSGEEKTVTYLDAEQELILPEIGYQLLHNYAEQVREWGWICSIQGSGTFKKNLNILHQQPTVITLLAVPCILGVNLSDGDLLEFLQQLSDTDGSSTLPPSVLRVLNYKACRGAIMFGDSLLPSECSLIVEELKQTTLCFQCAHGRPTTIPVVNLEALQKQVAKLGVLNDGSNDLWHGLRRQELSLERAAQRLSAARG